The networkx package changed the way they to_pydot works [1].
This patch updates TaskFlow to work with the newer version.
[1] f5031dd9c6
Change-Id: I99f87af0b2bed959fcb43ef611b3186e23bd9549
Closes-Bug: #1561656
		
	
		
			
				
	
	
		
			201 lines
		
	
	
		
			7.3 KiB
		
	
	
	
		
			Python
		
	
	
	
	
	
			
		
		
	
	
			201 lines
		
	
	
		
			7.3 KiB
		
	
	
	
		
			Python
		
	
	
	
	
	
# -*- coding: utf-8 -*-
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#    Copyright (C) 2012 Yahoo! Inc. All Rights Reserved.
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#
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#    Licensed under the Apache License, Version 2.0 (the "License"); you may
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#    not use this file except in compliance with the License. You may obtain
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#    a copy of the License at
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#
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#         http://www.apache.org/licenses/LICENSE-2.0
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#
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#    Unless required by applicable law or agreed to in writing, software
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#    distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
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#    WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
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#    License for the specific language governing permissions and limitations
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#    under the License.
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import collections
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import os
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import networkx as nx
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from networkx.drawing import nx_pydot
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import six
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def _common_format(g, edge_notation):
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    lines = []
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    lines.append("Name: %s" % g.name)
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    lines.append("Type: %s" % type(g).__name__)
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    lines.append("Frozen: %s" % nx.is_frozen(g))
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    lines.append("Density: %0.3f" % nx.density(g))
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    lines.append("Nodes: %s" % g.number_of_nodes())
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    for n, n_data in g.nodes_iter(data=True):
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        if n_data:
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            lines.append("  - %s (%s)" % (n, n_data))
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        else:
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            lines.append("  - %s" % n)
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    lines.append("Edges: %s" % g.number_of_edges())
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    for (u, v, e_data) in g.edges_iter(data=True):
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        if e_data:
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            lines.append("  %s %s %s (%s)" % (u, edge_notation, v, e_data))
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        else:
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            lines.append("  %s %s %s" % (u, edge_notation, v))
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    return lines
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class Graph(nx.Graph):
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    """A graph subclass with useful utility functions."""
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    def __init__(self, data=None, name=''):
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        super(Graph, self).__init__(name=name, data=data)
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        self.frozen = False
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    def freeze(self):
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        """Freezes the graph so that no more mutations can occur."""
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        if not self.frozen:
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            nx.freeze(self)
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        return self
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    def export_to_dot(self):
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        """Exports the graph to a dot format (requires pydot library)."""
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        return nx_pydot.to_pydot(self).to_string()
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    def pformat(self):
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        """Pretty formats your graph into a string."""
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        return os.linesep.join(_common_format(self, "<->"))
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class DiGraph(nx.DiGraph):
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    """A directed graph subclass with useful utility functions."""
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    def __init__(self, data=None, name=''):
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        super(DiGraph, self).__init__(name=name, data=data)
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        self.frozen = False
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    def freeze(self):
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        """Freezes the graph so that no more mutations can occur."""
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        if not self.frozen:
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            nx.freeze(self)
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        return self
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    def get_edge_data(self, u, v, default=None):
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        """Returns a *copy* of the edge attribute dictionary between (u, v).
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        NOTE(harlowja): this differs from the networkx get_edge_data() as that
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        function does not return a copy (but returns a reference to the actual
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        edge data).
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        """
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        try:
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            return dict(self.adj[u][v])
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        except KeyError:
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            return default
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    def topological_sort(self):
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        """Return a list of nodes in this graph in topological sort order."""
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        return nx.topological_sort(self)
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    def pformat(self):
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        """Pretty formats your graph into a string.
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        This pretty formatted string representation includes many useful
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        details about your graph, including; name, type, frozeness, node count,
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        nodes, edge count, edges, graph density and graph cycles (if any).
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        """
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        lines = _common_format(self, "->")
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        cycles = list(nx.cycles.recursive_simple_cycles(self))
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        lines.append("Cycles: %s" % len(cycles))
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        for cycle in cycles:
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            buf = six.StringIO()
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            buf.write("%s" % (cycle[0]))
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            for i in range(1, len(cycle)):
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                buf.write(" --> %s" % (cycle[i]))
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            buf.write(" --> %s" % (cycle[0]))
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            lines.append("  %s" % buf.getvalue())
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        return os.linesep.join(lines)
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    def export_to_dot(self):
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        """Exports the graph to a dot format (requires pydot library)."""
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        return nx.to_pydot(self).to_string()
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    def is_directed_acyclic(self):
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        """Returns if this graph is a DAG or not."""
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        return nx.is_directed_acyclic_graph(self)
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    def no_successors_iter(self):
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        """Returns an iterator for all nodes with no successors."""
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        for n in self.nodes_iter():
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            if not len(self.successors(n)):
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                yield n
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    def no_predecessors_iter(self):
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        """Returns an iterator for all nodes with no predecessors."""
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        for n in self.nodes_iter():
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            if not len(self.predecessors(n)):
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                yield n
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    def bfs_predecessors_iter(self, n):
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        """Iterates breadth first over *all* predecessors of a given node.
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        This will go through the nodes predecessors, then the predecessor nodes
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        predecessors and so on until no more predecessors are found.
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        NOTE(harlowja): predecessor cycles (if they exist) will not be iterated
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        over more than once (this prevents infinite iteration).
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        """
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        visited = set([n])
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        queue = collections.deque(self.predecessors_iter(n))
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        while queue:
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            pred = queue.popleft()
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            if pred not in visited:
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                yield pred
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                visited.add(pred)
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                for pred_pred in self.predecessors_iter(pred):
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                    if pred_pred not in visited:
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                        queue.append(pred_pred)
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class OrderedDiGraph(DiGraph):
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    """A directed graph subclass with useful utility functions.
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    This derivative retains node, edge, insertation and iteration
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    ordering (so that the iteration order matches the insertation
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    order).
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    """
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    node_dict_factory = collections.OrderedDict
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    adjlist_dict_factory = collections.OrderedDict
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    edge_attr_dict_factory = collections.OrderedDict
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def merge_graphs(graph, *graphs, **kwargs):
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    """Merges a bunch of graphs into a new graph.
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    If no additional graphs are provided the first graph is
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    returned unmodified otherwise the merged graph is returned.
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    """
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    tmp_graph = graph
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    allow_overlaps = kwargs.get('allow_overlaps', False)
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    overlap_detector = kwargs.get('overlap_detector')
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    if overlap_detector is not None and not six.callable(overlap_detector):
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        raise ValueError("Overlap detection callback expected to be callable")
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    elif overlap_detector is None:
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        overlap_detector = (lambda to_graph, from_graph:
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                            len(to_graph.subgraph(from_graph.nodes_iter())))
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    for g in graphs:
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        # This should ensure that the nodes to be merged do not already exist
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        # in the graph that is to be merged into. This could be problematic if
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        # there are duplicates.
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        if not allow_overlaps:
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            # Attempt to induce a subgraph using the to be merged graphs nodes
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            # and see if any graph results.
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            overlaps = overlap_detector(graph, g)
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            if overlaps:
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                raise ValueError("Can not merge graph %s into %s since there "
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                                 "are %s overlapping nodes (and we do not "
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                                 "support merging nodes)" % (g, graph,
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                                                             overlaps))
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        graph = nx.algorithms.compose(graph, g)
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    # Keep the first graphs name.
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    if graphs:
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        graph.name = tmp_graph.name
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    return graph
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